FastQCFastQC Report
Mon 25 Mar 2013
32.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 32.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 31669793
Filtered Sequences 0
Sequence length 49
%GC 50

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 2122947 6.703381357749954 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1624643 5.12994511836563 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1599069 5.0491930907158125 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 1166581 3.683576334079607 RNA PCR Primer, Index 1 (100% over 25bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 1048958 3.3121719488346515 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 573363 1.8104412618042687 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 494925 1.5627667664262914 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 365590 1.1543807690817556 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 339377 1.0716110458947425 RNA PCR Primer, Index 1 (100% over 28bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 318019 1.0041713881742138 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 315990 0.9977646522665936 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 312550 0.9869025667455421 RNA PCR Primer, Index 1 (100% over 27bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 291728 0.921155373513177 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 287777 0.9086797630789694 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 258784 0.8171319591511066 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 258542 0.8163678240650325 RNA PCR Primer, Index 1 (100% over 28bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 233655 0.737785055936425 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 215211 0.6795465950787869 RNA PCR Primer, Index 1 (100% over 25bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 181864 0.5742506747675932 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 170285 0.5376890212070538 RNA PCR Primer, Index 1 (100% over 26bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 137534 0.43427502036404214 RNA PCR Primer, Index 1 (100% over 33bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 137097 0.43289515659290856 RNA PCR Primer, Index 1 (100% over 26bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCA 136394 0.4306753757436937 RNA PCR Primer, Index 7 (100% over 35bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 132505 0.4183955354555049 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 121188 0.38266116864104543 RNA PCR Primer, Index 1 (100% over 25bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 117643 0.3714675369049618 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 117362 0.3705802560818759 RNA PCR Primer, Index 1 (100% over 28bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCAT 113902 0.3596550189008182 RNA PCR Primer, Index 9 (97% over 36bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 111801 0.35302093701717596 RNA PCR Primer, Index 1 (100% over 26bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 103146 0.32569205614953023 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 101027 0.3190011377718825 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 98341 0.3105198698330614 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 95887 0.3027711611503113 RNA PCR Primer, Index 1 (100% over 25bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 92832 0.2931247450843774 No Hit
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 92672 0.2926195318043285 RNA PCR Primer, Index 1 (100% over 29bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 87625 0.27668321040178573 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 87188 0.2753033466306521 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 86707 0.2737845492075051 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 86694 0.2737435006285011 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 83464 0.26354450753751374 RNA PCR Primer, Index 1 (100% over 26bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 80275 0.2534749753495389 No Hit
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC 78223 0.24699561503291165 RNA PCR Primer, Index 2 (100% over 34bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 75488 0.2383596255270756 RNA PCR Primer, Index 1 (100% over 25bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 75425 0.23816069779805635 RNA PCR Primer, Index 1 (100% over 26bp)
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 73305 0.23146662183740827 RNA PCR Primer, Index 1 (100% over 27bp)
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA 72626 0.2293226229802007 No Hit
CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT 72280 0.22823009926209495 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 70153 0.22151392022044478 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCTCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 67991 0.21468722577378385 RNA PCR Primer, Index 1 (100% over 25bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 66141 0.20884569722321836 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 64707 0.20431772320077998 RNA PCR Primer, Index 1 (100% over 26bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 64376 0.2032725632276788 RNA PCR Primer, Index 1 (100% over 24bp)
GTAGTCGTGGCCGAGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC 61860 0.19532808439890972 RNA PCR Primer, Index 2 (100% over 34bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 59802 0.1888297785842806 RNA PCR Primer, Index 1 (100% over 30bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 59774 0.18874136626027205 RNA PCR Primer, Index 1 (100% over 26bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCATGGAATTCTCGGGTGCC 58953 0.1861489906170211 No Hit
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 58764 0.1855522074299633 RNA PCR Primer, Index 1 (100% over 31bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 58315 0.18413445266282605 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 57825 0.18258723699267626 RNA PCR Primer, Index 1 (100% over 25bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA 55706 0.17589631861502852 No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 54482 0.17203143702265436 No Hit
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTGGAATTCTCGGGTGCCA 52279 0.16507528167298094 No Hit
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 50409 0.1591706014624093 RNA PCR Primer, Index 1 (100% over 32bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 50188 0.15847277561934175 RNA PCR Primer, Index 1 (100% over 26bp)
AGAGGTAGTAGGTTGCATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 50072 0.1581064959913063 RNA PCR Primer, Index 1 (100% over 28bp)
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATGGAATTCTCGGGTG 48714 0.15381849827689117 No Hit
GACTCTTAGCGGTGGATCACTCGGCTGGAATTCTCGGGTGCCAAGGAAC 48681 0.15371429803788106 RNA PCR Primer, Index 1 (100% over 24bp)
CACTAGATTGAGAGCTCCTGGAATGGAATTCTCGGGTGCCAAGGAACTC 48413 0.15286806579379916 RNA PCR Primer, Index 1 (100% over 26bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 47532 0.15008623517052985 RNA PCR Primer, Index 1 (100% over 32bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 45148 0.1425585572978011 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 44933 0.14187967695273537 RNA PCR Primer, Index 1 (100% over 28bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 44690 0.14111238428366107 No Hit
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 44605 0.14084398972863513 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTGGAATTCTCGGGTGCCAAGGAACTCCA 42603 0.1345225085620231 RNA PCR Primer, Index 1 (100% over 28bp)
CCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTCC 41114 0.12982086747456795 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 39838 0.1257917915661779 RNA PCR Primer, Index 1 (100% over 28bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTGGAATTCTCGGGTGCCA 39399 0.1244056126290437 No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGGAATTCTCGGGTGCCA 38470 0.12147221802175973 No Hit
TAGCAGCACGTAAATATTGGTGTGGAATTCTCGGGTGCCAAGGAACTCC 37277 0.11770522150239505 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 36108 0.11401400697503769 RNA PCR Primer, Index 1 (100% over 26bp)
TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC 36062 0.11386875815702364 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAAAAAATTGATTTGACTGGAATTCTCGGGTGCCAAGGAACTCC 36003 0.1136824607600056 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGATGGAATTCTCGGGTGCCAAGGAACTCC 35352 0.11162687422680659 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGATGAAGCACTGTAGCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 34605 0.10926815972557824 RNA PCR Primer, Index 1 (100% over 29bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 34069 0.10757569523741439 No Hit
AGCAGCATTGTACAGGGCTATGTGGAATTCTCGGGTGCCAAGGAACTCC 32757 0.10343294634101334 RNA PCR Primer, Index 1 (100% over 27bp)
GCGTTCGCGCTTTCCCCTGTGGAATTCTCGGGTGCCAAGGAACTCCAGT 32253 0.10184152450885928 RNA PCR Primer, Index 1 (100% over 30bp)
CCCCCCACTGCTAAATTTGACTGGCTTGGAATTCTCGGGTGCCAAGGAA 31826 0.10049323656772875 RNA PCR Primer, Index 1 (100% over 23bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 32427320 28.162558 361.69705 26
TTCTC 32308805 27.256496 350.80023 28
GCCAA 29252145 26.314697 372.5813 37
CCAAG 29120935 26.196663 372.67065 38
TGCCA 31116740 25.66181 341.09955 36
ATTCT 32214845 25.648952 331.47675 27
AACTC 24235330 24.327248 414.90277 44
TCTCG 32112520 24.278402 314.32715 29
GAACT 29103075 22.651478 321.80396 43
GAATT 32449165 21.851347 280.89432 25
CTCGG 31986980 21.672827 281.4092 30
ACTCC 19431745 20.667662 439.64194 45
GTGCC 30358405 20.569384 280.3276 35
CAAGG 28652130 19.985325 288.93817 39
GGAAT 32279970 19.480694 251.62186 24
TGGAA 32003140 19.31363 251.51057 23
GGAAC 27634685 19.275639 288.4872 42
AAGGA 28455265 18.73188 272.6461 40
AGGAA 27954815 18.402437 272.57648 41
TCGGG 31607855 16.605463 218.07056 31
CGGGT 31539595 16.569603 217.53827 32
GGTGC 31126255 16.35245 217.57396 34
GGGTG 31509745 12.83555 168.72385 33
CTCCA 10308615 10.964274 136.66962 45
TTGGA 14469255 8.005159 131.98268 22
TCCAG 8065350 6.651451 57.4283 45
CCAGT 7348865 6.06057 52.704266 7
TCAGA 7529990 5.8607345 216.15138 8
GACTG 9133650 5.8405156 172.73727 11
CAGAC 6387405 5.745993 242.49194 9
TATCA 6243175 5.4220877 233.93903 6
TTATC 6663305 5.3052187 214.46887 5
ACTGA 6621200 5.153406 209.77971 12
TGATG 9193780 5.086487 149.10143 14
AGACT 6477785 5.0417833 210.03336 10
ATCAG 6452210 5.021878 210.04375 7
CTGAT 6896185 4.920612 192.39185 13
CTTAT 6046850 4.8144073 213.61148 4
AGCTT 6462570 4.6112165 190.65935 2
CTGGA 7072250 4.5223527 52.353073 23
TAGCT 6187350 4.4148393 190.62271 1
CAGTC 5346210 4.408991 26.466583 42
GCTTA 6065255 4.3277216 191.41223 3
AGTCA 5310500 4.133263 29.462538 12
TGTTG 7945390 4.0298758 135.85284 17
GTTGA 7256355 4.014601 138.68153 18
ATGGA 6582050 3.9722123 75.655464 22
ATGTT 6197640 3.8260753 166.26225 16
GATGT 6406695 3.5445235 149.18443 15
CTTGG 5798555 3.3992193 41.179497 23
TCACC 3171560 3.3732805 34.147663 45
GTGGA 6733125 3.3383904 21.705267 21
CACCA 2787830 3.2343965 31.534857 45
TTGAC 4456870 3.180096 106.23249 19
ACTTG 4375030 3.1217005 40.228886 22
GTCAC 3785145 3.121589 26.476803 44
GTAGT 5588665 3.0919464 99.569855 5
TGACT 4220925 3.0117428 94.25308 20
TAGTA 4212950 2.8370109 121.107124 6
AGTAG 4359480 2.6309097 108.064865 7
AGGTA 4331000 2.6137226 108.20675 3
TTTGG 5043380 2.5579853 65.34493 21
TAGTT 4067085 2.51079 91.7027 18
ACTGG 3823420 2.4448872 49.224094 22
GGTAG 4920020 2.439424 87.899185 4
ATAGT 3518500 2.3693664 101.64341 17
TTGTA 3670600 2.2660227 92.92882 13
GTATA 3345665 2.2529793 97.19819 15
TATAG 3328205 2.2412217 96.704865 16
TGTAT 3590115 2.2163363 90.55867 14
GTAGA 3598585 2.1717165 74.05575 8
AGATT 3139870 2.114396 82.0453 10
TGAGG 4246795 2.1056287 84.66535 1
GAGGT 4184450 2.074717 87.465576 2
TAGAT 3064850 2.0638776 81.97424 9
ACCAT 1998655 2.0062354 23.406244 45
GTTTG 3952310 2.0045986 61.985012 20
ATTGT 3228010 1.9927925 75.37077 12
GACTT 2745960 1.9593158 39.899246 21
AGTTT 3119375 1.9257271 64.40544 19
GATTG 3432720 1.8991628 68.14872 11
GATGG 3719820 1.8443457 56.56107 21
AGAAC 2095200 1.7788144 54.29904 15
GTTGG 3850850 1.7503692 31.681007 21
AGTTG 3077520 1.7026472 35.349987 9
CTGTT 2479090 1.6216424 45.346245 19
TCCCG 1841460 1.6091294 36.286434 12
AACTG 2027000 1.5776527 48.67506 17
AAGAA 1950055 1.5624871 51.44919 14
TTGAT 2519370 1.5553179 62.105568 19
ACTGT 2158715 1.5403008 44.488377 18
AAGCT 1923525 1.4971161 49.748775 1
GCACT 1757220 1.44917 41.518 5
TGTGG 3159600 1.4361677 15.379359 20
CACTT 1555620 1.4315287 45.067486 6
AGCTG 2226250 1.4235762 40.432915 2
GCTGT 2372660 1.3908968 15.775491 11
CTGCC 1560535 1.3636477 55.67299 4
AGTGG 2749860 1.3634242 19.169 6
CGTGG 2479840 1.3028057 9.09957 19
GCCTG 1879100 1.273187 27.602062 17
CTGTG 2146320 1.2582121 13.419345 21
CCATT 1354615 1.2465578 14.046302 45
CCTGG 1832860 1.241857 6.5804396 17
GCTTG 2108780 1.2362055 21.318289 20
CCCCC 947310 1.2339289 24.953043 1
CAGTT 1728110 1.2330526 45.579887 8
GCCAG 1657315 1.2248838 47.321762 6
AGGCT 1894610 1.211509 20.319315 18
TTCAA 1370400 1.1901684 30.29085 1
AATCC 1158495 1.1628888 28.804821 8
TGCAC 1408540 1.1616155 41.512394 4
TTGAA 1696600 1.1424947 43.16584 11
GCTAA 1452715 1.1306757 41.92929 10
GGCTT 1928670 1.1306217 23.296173 19
TCACA 1091540 1.0956799 41.01442 2
CAGAA 1267415 1.0760291 32.0725 15
CCTGT 1420090 1.0736471 29.84933 18
TTGCA 1496285 1.0676394 36.094048 3
GAAGA 1613280 1.0620097 42.069366 13
GCTGC 1549425 1.0498153 42.965786 3
TGAAG 1738425 1.0491251 38.667416 12
CCGTG 1539625 1.0431752 10.698719 18
ATTGC 1457435 1.0399188 35.954918 2
GCTGG 1977375 1.0388312 10.120393 21
TCTGA 1438435 1.0263618 7.899519 18
CCCGG 1302345 1.0198853 32.369026 13
GGCCT 1501155 1.0171098 28.32839 16
CAGTG 1545195 0.98807544 24.687323 5
GTCCC 1101415 0.9624534 36.131523 11
CCGGC 1222200 0.9571225 32.363914 14
AACAT 1009160 0.9560234 24.530441 1
CGGCC 1220570 0.9558462 32.43866 15
CATGG 1462020 0.9348892 7.2435117 23
CCCAA 805315 0.93431383 20.88159 10
CACAG 1034690 0.9307883 35.37285 3
TTCCC 949895 0.9262063 8.058772 8
ACAGT 1178755 0.91744745 29.707726 4
GTTCC 1212315 0.91656077 14.6929655 15
CAAGT 1169420 0.9101819 27.342264 3
GGACT 1353955 0.86578697 24.106138 4
TGCTG 1472485 0.8631978 13.499532 16
GGCTG 1636925 0.8599728 9.924234 20
TTGTC 1313805 0.8593967 32.055805 9
CAGGA 1229805 0.85780895 24.69026 12
CCCGT 972095 0.8494492 7.3478107 10
CTTGT 1296400 0.8480116 32.055805 8
TTCAC 921215 0.84773004 34.987217 1
TGGCT 1420095 0.83248574 22.867815 8
CCCAC 676520 0.8316549 19.699669 4
CAACG 909120 0.8178278 20.872463 7
CACGT 987185 0.8141262 6.7706637 4
GGCTA 1266760 0.81003004 24.544353 9
TATTG 1308550 0.8078255 25.52219 1
GTGGT 1773580 0.8061647 9.236705 15
CTAAG 1030100 0.8017464 30.0924 11
TGTCC 1058975 0.8006293 30.231857 10
CATTT 1000040 0.79621613 8.889819 45
CCACT 743860 0.79117167 16.951933 5
TTCTG 1193870 0.7809439 11.760876 16
CCAGG 1054500 0.77935684 21.304043 11
TCCTT 918055 0.7744936 11.51204 11
AAGTA 1042130 0.7654979 25.76462 4
AGGAT 1259075 0.7598413 21.352127 13
CTGTA 1063500 0.7588357 12.541405 19
ACCAC 652490 0.7570087 10.660202 2
CGTTC 997000 0.7537735 6.2287016 6
GGTGG 1848105 0.75282884 5.108483 6
CCCCA 610720 0.7507661 20.32231 3
GTAAT 1097440 0.73901886 23.799599 6
TCGGT 1260570 0.73896927 15.38731 15
AAGTT 1075630 0.72433186 25.544487 13
CATTG 1014850 0.7241225 8.334837 2
TAGGC 1125840 0.71991867 19.383272 17
AGTTC 1002795 0.7155209 26.434357 14
ACATT 816905 0.7094677 22.574661 2
GTGCT 1200415 0.7037053 13.471049 15
GTCAG 1095835 0.7007321 24.244774 13
ATCCA 696080 0.69872004 28.651518 9
ATCCC 650045 0.6913898 23.468355 8
GAAGG 1276270 0.6902564 19.954176 17
CACTG 834515 0.6882201 13.353956 6
TGGAC 1073730 0.686597 23.855371 3
TAAGT 1019425 0.68648326 26.004644 12
CCACG 720125 0.6864107 7.7831926 3
CTGTC 902365 0.6822255 20.21513 12
ATTCA 774115 0.6723053 22.599068 4
GTGGC 1279285 0.6720836 22.724255 7
GACCT 813900 0.67121905 7.492997 4
AGAAG 1018880 0.6707208 24.818865 16
AGTAA 904995 0.66476524 25.830048 5
TTGTG 1298430 0.6585593 11.792171 13
AGGTT 1190140 0.65844864 17.513731 10
TCAAG 844180 0.6570414 27.118124 2
TAGTG 1181815 0.65384275 8.995098 15
GAGTC 1018435 0.6512386 24.324862 11
ATAGG 1075040 0.64877766 22.720335 16
AATGG 1073935 0.6481108 5.4750543 23
CATTC 702815 0.6467517 24.279312 3
AGCAG 921090 0.6424752 10.715717 16
TAGGT 1159980 0.64176244 17.12901 9
CTCCT 653335 0.6370419 13.296412 10
AACGC 704900 0.6341152 21.072372 8
AAGGC 907895 0.6332714 20.179144 18
TAATC 728180 0.63241154 24.943056 7
GCCCA 661640 0.6306638 5.170838 11
GTAGG 1268590 0.62898713 15.932534 8
ATACC 621140 0.6234958 6.3407893 19
TCAAC 614560 0.61689085 23.463354 6
ACGTT 862435 0.6153704 5.8877473 5
CTGCT 811820 0.6137697 12.241605 8
AAGCA 721780 0.6127876 13.042838 15
ACTGC 742395 0.6122492 13.130991 7
TCCCA 574160 0.6106783 16.106968 9
TATGG 1102740 0.6100943 11.38717 22
AAAGC 706795 0.6000654 12.936018 14
CCAAA 547585 0.59957427 16.557379 11
CACTA 588480 0.59071195 8.312738 1
CGCTG 871190 0.5902761 15.875082 10
AGAAT 798440 0.58649516 10.087656 4
GGATA 970420 0.58564043 21.24937 14
ATTTG 944295 0.5829549 9.843003 15
GATAG 957655 0.57793677 21.753317 15
GCAGC 774955 0.5727516 11.192292 17
TTTTG 1005045 0.5688075 7.961383 14
GTTGT 1115505 0.56578046 12.898662 12
GTCGG 1067695 0.560923 13.978211 14
TGGAG 1131005 0.5607703 18.98064 9
CAAAG 653295 0.5546441 15.21196 1
CGACC 577570 0.5505297 7.959023 3
GGAGT 1101385 0.5460842 18.923647 10
CGGTG 1033080 0.5427376 13.881893 16
AGCTC 657405 0.54215837 6.9591084 13
ATTTT 786595 0.54185337 5.827837 45
TCAGT 755495 0.53906584 9.804794 12
TAAAT 653325 0.53549427 12.780652 12
GGGCT 1018495 0.53507525 7.155244 18
GGTTG 1167220 0.5305492 14.447082 11
CTTCT 628790 0.53046256 5.3090544 1
AAATT 644880 0.5285724 13.06881 13
CTCAG 620495 0.5117189 6.901334 7
TTTGT 900915 0.5098748 15.415224 12
GTTAT 820610 0.5065987 8.783238 20
ACGCT 602925 0.49722907 19.18925 9
AATTT 659190 0.4953232 11.949101 14
TGAGT 893315 0.49422932 11.691002 19
TAGAA 672585 0.49404818 7.923783 19
TCGCC 565045 0.49375522 8.444618 27
ACGGA 707685 0.49362177 11.12386 3
GTAAA 669160 0.49153242 11.727036 2
ACATC 486990 0.488837 16.684805 6
AAAAG 609690 0.48851585 12.31491 13
CTAAA 513850 0.4867936 14.756319 11
CGGAA 693405 0.48366123 10.731091 4
GAATC 620630 0.4830481 12.006571 6
AAAGA 598945 0.47990644 10.887436 2
AAACA 463390 0.47885346 17.116417 4
TCCGT 630620 0.476775 11.8430395 17
TGAGA 789520 0.47646883 5.478357 9
TCTCA 510105 0.46941411 7.3664894 25
CAAAA 451000 0.46604997 15.980309 12
CATCC 435955 0.46368304 17.480873 7
TTTGA 748420 0.4620326 9.723586 16
ATCAC 456490 0.45822132 5.994882 21
ACTAG 586515 0.4564958 6.401171 2
TCCGA 552825 0.45591182 14.657428 7
TCTCC 466575 0.45493942 13.37697 9
TTCCG 599035 0.4528954 12.430063 16
ACCTG 546635 0.45080698 5.100021 22
ACATG 577250 0.44928467 8.268254 22
CAGCT 541330 0.446432 13.253277 18
TGTAA 662005 0.4457959 10.8107395 1
TAAAC 470380 0.4456125 15.815015 3
CTTTT 608570 0.4441981 10.066954 13
CAGCA 486890 0.43799737 8.49109 4
GTCCG 633900 0.42949995 12.309081 6
CTACT 462845 0.425924 5.8708715 8
GTGAG 854500 0.42367467 10.798338 18
TGTCG 716190 0.41984376 15.336161 13
ACCTC 392750 0.41773006 9.768055 5
AGCAC 462920 0.4164344 6.126212 5
CCTTT 490190 0.41353625 11.464802 12
TCCTG 545700 0.41257194 6.4011555 16
GCATT 573325 0.4090827 8.18617 1
GAGTT 738750 0.4087157 8.41569 20
GGTCC 599170 0.40596852 12.342149 5
TGGTT 798825 0.40516138 5.6620893 8
AGAGC 575835 0.4016542 9.395724 11
CCTCA 376370 0.40030828 8.802756 6
ACTAC 397940 0.39944926 6.1337247 7
CTGGT 679080 0.39808914 9.782775 3
GGTGA 801850 0.39756998 11.354386 17
TGTTT 700170 0.3962628 10.160383 19
GAGCT 618385 0.39542648 5.527259 12
TGACA 505105 0.39313287 8.07343 20
GTTCT 599665 0.39225775 11.703349 15
TCACT 422465 0.3887651 5.5993094 5
GATCA 499145 0.38849404 6.5280256 11
GGTCT 659590 0.3866637 5.584093 16
CCCCG 381950 0.38576087 7.1307077 10
ATCTC 418060 0.3847115 7.4332786 24
TGCTA 533595 0.38073432 11.093732 9
TGTCT 581295 0.3802414 6.1680555 10
TCTGT 578985 0.37873033 8.1020355 17
CGACT 456045 0.3760979 9.249255 13
TGGTC 637505 0.37371713 10.383085 4
ATCCT 405095 0.3727807 9.013083 8
TACCA 370480 0.37188512 7.438357 23
TTCAG 520360 0.37129077 7.75851 11
CGGTC 547950 0.37126437 6.6171665 15
CCATA 363135 0.36451226 6.099455 2
TGTGC 616975 0.3616821 13.218932 14
CTCAC 339390 0.36097622 6.5479784 4
GACAT 463350 0.36063412 8.099514 21
CCCAT 338355 0.35987538 6.3537707 1
ATTGA 532945 0.3588865 5.7584095 7
GAAGC 511210 0.35657722 8.467811 19
TATCT 444595 0.35397956 6.474087 23
TACAG 451725 0.35158616 6.3874483 11
CTCGC 400300 0.34979555 9.000734 26
TGGTA 629120 0.3480626 6.2178235 16
TCCCC 308540 0.3477175 7.9586926 9
AGACC 385180 0.3465009 5.3961916 4
AACGG 495480 0.34560534 11.0966 2
GGTTA 621385 0.34378317 5.179355 20
CGATG 534780 0.34196526 5.5819893 9
CTAGA 437955 0.3408687 6.3732505 3
TTATG 550070 0.33958244 8.688815 21
GCCCC 327760 0.33103022 5.102974 14
TGGGC 617745 0.32453775 7.5210896 17
AGTTA 469295 0.3160244 6.340667 19
AGCAT 403460 0.3140206 6.5252495 4
CCGAA 348535 0.31353572 8.980807 8
GCGAC 422710 0.31241533 5.9672427 2
CAGAT 393800 0.30650204 6.594651 9
AAGGT 505320 0.30495644 5.071735 11
CCGAC 317750 0.30287382 7.0575423 12
GAGAG 552295 0.2987026 7.3540945 10
CATAG 383160 0.29822072 9.865398 16
CCCCT 263615 0.29708806 5.68545 15
CCGAT 359710 0.29665092 6.529788 8
GGTTC 500875 0.29362208 6.555718 9
AAATA 326885 0.29225907 6.3087783 12
GACCC 305280 0.2909876 6.1143684 24
CTCAA 285590 0.28667316 7.995379 26
GCTCC 327405 0.28609744 7.282759 14
AGAGG 527145 0.28510052 6.202748 1
CCCGC 281585 0.2843945 5.808682 26
ACAGG 399365 0.27856356 6.1582875 12
GGAAG 514285 0.2781453 6.942254 18
GTTCA 388405 0.27713737 7.819819 10
GTACA 351510 0.27358696 6.369942 10
GACTA 348800 0.27147767 5.0199733 19
CCCTC 240390 0.27091402 5.4580727 16
CCAGA 299105 0.2690694 6.6334047 25
AGATC 344725 0.26830602 6.3431563 10
AGTGA 440750 0.26598895 5.0833664 16
AGCCC 274730 0.26186788 5.466063 10
TTGGG 569215 0.2587315 6.57841 16
CCCGA 268440 0.25587237 6.790182 11
AGACG 365020 0.25460738 5.356996 15
ACCCG 266175 0.2537134 6.030593 25
TAATT 335890 0.25239176 5.1352496 7
GTCTC 332735 0.25156155 6.989768 11
TTTCC 297755 0.25119337 5.271392 2
TGTAC 347465 0.2479256 5.854847 9
CGAAG 347755 0.24256475 6.0637646 9
CAGAG 341925 0.23849823 5.0905814 8
ACCAG 264525 0.23796187 6.7019386 24
TCAAT 269975 0.23446856 6.9158163 27
ATAAA 257795 0.23048756 5.3385496 4
CCGCT 262240 0.2291541 5.037051 27
TGCAT 309355 0.22073306 5.5777483 14
CGCGA 295230 0.21819776 6.3225975 1
CTGCA 263600 0.2173895 5.0840983 11
CATAA 226790 0.21484853 5.596825 3
GCTAT 299655 0.21381183 5.4074163 17
GCATA 259920 0.20230068 6.041644 15
TTACC 214340 0.19724217 6.8466682 22
TAGCA 231925 0.18051164 6.124579 1
CCGTA 209745 0.17297557 5.3988256 5
ACCTA 159245 0.15984897 5.3593044 6
GTTAC 214420 0.15299441 5.3719416 21